Index

_

__init__() (hydroBayesCal.hysim.HydroSimulations method) (hydroBayesCal.surrogate.gpe_gpytorch.MultiGPyTraining method) (hydroBayesCal.surrogate.gpe_gpytorch.MultitaskGPModel method) (hydroBayesCal.telemac.control_telemac.TelemacModel method)

A

analytical_bal() (hydroBayesCal.surrogate.bal_functions.SequentialDesign method) append_new_line() (in module hydroBayesCal.function_pool)

approximate_voronoi() (hydroBayesCal.surrogate.exploration.Exploration method) asr_dir (hydroBayesCal.hysim.HydroSimulations attribute)

B

bal_iteration (hydroBayesCal.telemac.control_telemac.TelemacModel attribute) bayesian_active_learning() (hydroBayesCal.surrogate.bal_functions.SequentialDesign method)

BayesianInference (class in hydroBayesCal.surrogate.bal_functions) BME (hydroBayesCal.surrogate.bal_functions.BayesianInference attribute)

C

calculate_constants() (hydroBayesCal.surrogate.bal_functions.BayesianInference method) calculate_likelihood() (hydroBayesCal.surrogate.bal_functions.BayesianInference method) calculate_likelihood_manual() (hydroBayesCal.surrogate.bal_functions.BayesianInference method) calculate_likelihood_with_error() (hydroBayesCal.surrogate.bal_functions.BayesianInference method) calculate_settling_velocity() (in module hydroBayesCal.function_pool) calibration_folder (hydroBayesCal.hysim.HydroSimulations attribute) calibration_parameters (hydroBayesCal.hysim.HydroSimulations attribute) calibration_pts_df (hydroBayesCal.hysim.HydroSimulations attribute) calibration_pts_file_path (hydroBayesCal.hysim.HydroSimulations attribute) calibration_quantities (hydroBayesCal.hysim.HydroSimulations attribute) call_process() (in module hydroBayesCal.function_pool)

check_inputs() (hydroBayesCal.surrogate.bal_functions.SequentialDesign method) check_tm_inputs() (hydroBayesCal.telemac.control_telemac.TelemacModel static method) classify_mu() (in module hydroBayesCal.function_pool) classify_parameters_tm_gaia() (in module hydroBayesCal.function_pool) comm (hydroBayesCal.telemac.control_telemac.TelemacModel attribute) complete_bal_mode (hydroBayesCal.hysim.HydroSimulations attribute) concatenate_csv_pts() (in module hydroBayesCal.function_pool) control_file (hydroBayesCal.hysim.HydroSimulations attribute) convert_to_tensor() (hydroBayesCal.surrogate.gpe_gpytorch.GPyTraining static method) convert_to_vtk() (hydroBayesCal.openfoam.control_openfoam.OpenFOAMController method) cov_mat (hydroBayesCal.surrogate.bal_functions.BayesianInference attribute) create_cas_string() (hydroBayesCal.telemac.control_telemac.TelemacModel static method)

D

decompose_parallel_case() (hydroBayesCal.openfoam.control_openfoam.OpenFOAMController method) delete_complex_outputs (hydroBayesCal.hysim.HydroSimulations attribute) delete_slf() (in module hydroBayesCal.function_pool)

DELFT3D_BINDING_IMPLEMENTED (in module hydroBayesCal.delft3d.control_delft3d) Delft3DModel (class in hydroBayesCal.delft3d.control_delft3d) dict_output_name (hydroBayesCal.hysim.HydroSimulations attribute)

E

ELPD (hydroBayesCal.surrogate.bal_functions.BayesianInference attribute) estimate_bme() (hydroBayesCal.surrogate.bal_functions.BayesianInference method) exp_design (hydroBayesCal.surrogate.exploration.Exploration attribute) Exploration (class in hydroBayesCal.surrogate.exploration)

extract_data_point() (hydroBayesCal.hysim.HydroSimulations method) (hydroBayesCal.telemac.control_telemac.TelemacModel method) extract_fields_from_vtk() (hydroBayesCal.openfoam.control_openfoam.OpenFOAMController method) extraction_quantities (hydroBayesCal.hysim.HydroSimulations attribute)

F

filter_model_outputs() (in module hydroBayesCal.function_pool) forward() (hydroBayesCal.surrogate.gpe_gpytorch.MultitaskGPModel method) (hydroBayesCal.surrogate.gpe_gpytorch.MyExactGPyModel method)

fr_tbl (hydroBayesCal.telemac.control_telemac.TelemacModel attribute) friction_file (hydroBayesCal.telemac.control_telemac.TelemacModel attribute)

G

gaia_steering_file (hydroBayesCal.telemac.control_telemac.TelemacModel attribute) gaussian_overlap() (hydroBayesCal.surrogate.bal_functions.SequentialDesign static method) get_exploration_samples() (hydroBayesCal.surrogate.exploration.Exploration method)

get_mc_samples() (hydroBayesCal.surrogate.exploration.Exploration method) get_vornoi_samples() (hydroBayesCal.surrogate.exploration.Exploration method) GPyTraining (class in hydroBayesCal.surrogate.gpe_gpytorch)

H

hydroBayesCal.delft3d.control_delft3d module hydroBayesCal.function_pool module hydroBayesCal.hysim module hydroBayesCal.openfoam.control_openfoam module hydroBayesCal.surrogate.bal_functions module

hydroBayesCal.surrogate.exploration module hydroBayesCal.surrogate.gpe_gpytorch module hydroBayesCal.surrogate.gpe_skl module hydroBayesCal.telemac.control_telemac module HydroSimulations (class in hydroBayesCal.hysim)

I

IE (hydroBayesCal.surrogate.bal_functions.BayesianInference attribute) init_model_params() (hydroBayesCal.surrogate.gpe_gpytorch.GPyTraining static method)

init_runs (hydroBayesCal.hysim.HydroSimulations attribute) interpolate_values() (in module hydroBayesCal.function_pool)

L

likelihood (hydroBayesCal.surrogate.bal_functions.BayesianInference attribute)

log_actions() (in module hydroBayesCal.function_pool) lookahead() (in module hydroBayesCal.function_pool)

M

max_runs (hydroBayesCal.hysim.HydroSimulations attribute) mc_criterion (hydroBayesCal.surrogate.exploration.Exploration attribute) measurement_errors (hydroBayesCal.hysim.HydroSimulations attribute) model_dir (hydroBayesCal.hysim.HydroSimulations attribute) model_evaluations (hydroBayesCal.hysim.HydroSimulations attribute) module hydroBayesCal.delft3d.control_delft3d hydroBayesCal.function_pool hydroBayesCal.hysim hydroBayesCal.openfoam.control_openfoam hydroBayesCal.surrogate.bal_functions hydroBayesCal.surrogate.exploration hydroBayesCal.surrogate.gpe_gpytorch hydroBayesCal.surrogate.gpe_skl hydroBayesCal.telemac.control_telemac

MultiGPyTraining (class in hydroBayesCal.surrogate.gpe_gpytorch) multitask_selection (hydroBayesCal.hysim.HydroSimulations attribute) MultitaskGPModel (class in hydroBayesCal.surrogate.gpe_gpytorch) multivariate_gaussian_kl_divergence() (hydroBayesCal.surrogate.bal_functions.SequentialDesign static method) MyExactGPyModel (class in hydroBayesCal.surrogate.gpe_gpytorch) MyGeneralGPR (class in hydroBayesCal.surrogate.gpe_skl) MySklGPR (class in hydroBayesCal.surrogate.gpe_skl)

N

n_candidate (hydroBayesCal.surrogate.exploration.Exploration attribute) ndim (hydroBayesCal.hysim.HydroSimulations attribute) nloc (hydroBayesCal.hysim.HydroSimulations attribute) normalize_tp() (hydroBayesCal.surrogate.gpe_gpytorch.GPyTraining method)

nproc (hydroBayesCal.hysim.HydroSimulations attribute) num_calibration_quantities (hydroBayesCal.hysim.HydroSimulations attribute) num_extraction_quantities (hydroBayesCal.hysim.HydroSimulations attribute) num_run (hydroBayesCal.telemac.control_telemac.TelemacModel attribute)

O

observations (hydroBayesCal.hysim.HydroSimulations attribute) only_bal_mode (hydroBayesCal.hysim.HydroSimulations attribute) OpenFOAMController (class in hydroBayesCal.openfoam.control_openfoam) OpenFOAMModel (class in hydroBayesCal.openfoam.control_openfoam)

output_processing() (hydroBayesCal.delft3d.control_delft3d.Delft3DModel method) (hydroBayesCal.hysim.HydroSimulations method) (hydroBayesCal.openfoam.control_openfoam.OpenFOAMModel method) (hydroBayesCal.telemac.control_telemac.TelemacModel method)

P

param_dic (hydroBayesCal.hysim.HydroSimulations attribute) param_values (hydroBayesCal.hysim.HydroSimulations attribute) parameter_sampling_method (hydroBayesCal.hysim.HydroSimulations attribute) parse_classes_keyword() (in module hydroBayesCal.function_pool) post_likelihood (hydroBayesCal.surrogate.bal_functions.BayesianInference attribute)

posterior (hydroBayesCal.surrogate.bal_functions.BayesianInference attribute) posterior_log_likelihood() (hydroBayesCal.surrogate.bal_functions.SequentialDesign static method) predict_() (hydroBayesCal.surrogate.gpe_gpytorch.GPyTraining method) (hydroBayesCal.surrogate.gpe_gpytorch.MultiGPyTraining method) (hydroBayesCal.surrogate.gpe_skl.SklTraining method) python_shebang (hydroBayesCal.telemac.control_telemac.TelemacModel attribute)

R

rasterize() (in module hydroBayesCal.function_pool) RE (hydroBayesCal.surrogate.bal_functions.BayesianInference attribute) read_data() (hydroBayesCal.hysim.HydroSimulations static method) rearrange_array() (in module hydroBayesCal.function_pool) reconstruct_parallel_case() (hydroBayesCal.openfoam.control_openfoam.OpenFOAMController method) rejection_sampling() (hydroBayesCal.surrogate.bal_functions.BayesianInference method) res_dir (hydroBayesCal.hysim.HydroSimulations attribute) restart_data_folder (hydroBayesCal.hysim.HydroSimulations attribute) results_filename_base (hydroBayesCal.telemac.control_telemac.TelemacModel attribute)

rewrite_steering_file() (hydroBayesCal.telemac.control_telemac.TelemacModel method) run_al_functions() (hydroBayesCal.surrogate.bal_functions.SequentialDesign method) run_multiple_simulations() (hydroBayesCal.delft3d.control_delft3d.Delft3DModel method) (hydroBayesCal.hysim.HydroSimulations method) (hydroBayesCal.openfoam.control_openfoam.OpenFOAMModel method) (hydroBayesCal.telemac.control_telemac.TelemacModel method) run_sequential_design() (hydroBayesCal.surrogate.bal_functions.SequentialDesign method) run_simulation() (hydroBayesCal.openfoam.control_openfoam.OpenFOAMController method) run_single_simulation() (hydroBayesCal.hysim.HydroSimulations method) (hydroBayesCal.telemac.control_telemac.TelemacModel method)

S

save_calibration_data() (hydroBayesCal.openfoam.control_openfoam.OpenFOAMModel method) save_data() (in module hydroBayesCal.function_pool) save_valid_criteria() (in module hydroBayesCal.surrogate.gpe_gpytorch) (in module hydroBayesCal.surrogate.gpe_skl) select_indexes() (hydroBayesCal.surrogate.bal_functions.SequentialDesign method)

SequentialDesign (class in hydroBayesCal.surrogate.bal_functions) set_calibration_parameters() (hydroBayesCal.hysim.HydroSimulations method) set_observations_and_variances() (hydroBayesCal.hysim.HydroSimulations method) shebang (hydroBayesCal.telemac.control_telemac.TelemacModel attribute) SklTraining (class in hydroBayesCal.surrogate.gpe_skl) str2seq() (in module hydroBayesCal.function_pool)

T

tbl_creator() (hydroBayesCal.telemac.control_telemac.TelemacModel static method) TelemacModel (class in hydroBayesCal.telemac.control_telemac) tm_cas (hydroBayesCal.telemac.control_telemac.TelemacModel attribute) tm_results_filename (hydroBayesCal.telemac.control_telemac.TelemacModel attribute) tm_xd (hydroBayesCal.telemac.control_telemac.TelemacModel attribute) tm_xd_dict (hydroBayesCal.telemac.control_telemac.TelemacModel attribute)

train_() (hydroBayesCal.surrogate.gpe_gpytorch.GPyTraining method) (hydroBayesCal.surrogate.gpe_skl.SklTraining method) train_tasks_all() (hydroBayesCal.surrogate.gpe_gpytorch.MultiGPyTraining method) train_tasks_locations() (hydroBayesCal.surrogate.gpe_gpytorch.MultiGPyTraining method) train_tasks_variables() (hydroBayesCal.surrogate.gpe_gpytorch.MultiGPyTraining method) twodm2SLF() (in module hydroBayesCal.function_pool)

U

update_boundary_condition() (hydroBayesCal.openfoam.control_openfoam.OpenFOAMController method) update_collocation_pts_file() (in module hydroBayesCal.function_pool) update_dictionary_entry() (hydroBayesCal.openfoam.control_openfoam.OpenFOAMController method) update_gaia_class_line() (in module hydroBayesCal.function_pool)

update_json_file() (in module hydroBayesCal.function_pool) update_model_controls() (hydroBayesCal.hysim.HydroSimulations method) (hydroBayesCal.openfoam.control_openfoam.OpenFOAMController method) (hydroBayesCal.telemac.control_telemac.TelemacModel method) user_collocation_points (hydroBayesCal.hysim.HydroSimulations attribute)

V

validation (hydroBayesCal.hysim.HydroSimulations attribute) validation_error() (in module hydroBayesCal.surrogate.gpe_gpytorch) (in module hydroBayesCal.surrogate.gpe_skl)

vtk_to_2dm() (in module hydroBayesCal.function_pool)

W

w (hydroBayesCal.surrogate.exploration.Exploration attribute)